STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ61478.1Glycosyltransferase involved in cell wall bisynthesis. (359 aa)    
Predicted Functional Partners:
SHJ61514.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.861
SHJ61442.1
Glycosyl transferases group 1.
 
     0.726
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.679
SHI98061.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
  
 0.659
SHJ37693.1
Amino acid adenylation domain-containing protein.
   
 0.632
SHJ69734.1
Bacillithiol biosynthesis deacetylase BshB1.
   
 
  0.585
SHJ61183.1
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Belongs to the glycosyltransferase 26 family.
 
 
 0.583
SHJ61376.1
Glycosyltransferase, GT2 family.
 
    0.572
SHJ81058.1
Glycogen recognition site of AMP-activated protein kinase.
   
  0.538
SHI97497.1
Phosphoglucomutase.
   
 
  0.526
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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