STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ62056.1Predicted dithiol-disulfide isomerase, DsbA family. (229 aa)    
Predicted Functional Partners:
SHJ62089.1
Conserved hypothetical protein.
 
     0.881
SHJ62119.1
Alkylhydroperoxidase AhpD family core domain-containing protein.
 
     0.776
SHI40509.1
Arsenate reductase, glutaredoxin family; Belongs to the ArsC family.
   
 
 0.727
SHJ68552.1
Arsenate reductase; Belongs to the ArsC family.
   
 
 0.727
SHK05162.1
Hypothetical protein.
   
 
 0.727
SHJ62163.1
Transcriptional regulator, TetR family.
 
     0.664
SHJ90603.1
NAD(P)H-dependent FMN reductase.
  
    0.524
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
   0.437
SHI49126.1
Membrane-bound lytic murein transglycosylase D.
   
   0.419
SHI83527.1
Hypothetical protein.
  
     0.407
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.