STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ62481.1FAD dependent oxidoreductase. (562 aa)    
Predicted Functional Partners:
SHJ37693.1
Amino acid adenylation domain-containing protein.
    
 0.890
SHJ62442.1
Arylsulfatase A.
       0.727
SHJ04982.1
FAD dependent oxidoreductase.
  
     0.707
SHJ96504.1
Acetyl xylan esterase (AXE1).
 
     0.678
SHJ62404.1
Starch-binding associating with outer membrane.
 
     0.585
SHJ42158.1
Methane oxygenase PmoA.
  
     0.578
SHJ96526.1
Hypothetical protein.
  
     0.570
SHJ76972.1
Electron transfer flavoprotein beta subunit.
  
 
 0.543
SHJ06572.1
GDSL-like Lipase/Acylhydrolase family.
  
     0.531
SHJ94142.1
Hypothetical protein.
  
     0.531
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.