Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI68871.1 | SHI68947.1 | SAMN04488513_101999 | SAMN04488513_1011001 | Cu2+-exporting ATPase. | Copper chaperone CopZ. | 0.912 |
SHI68871.1 | SHJ05859.1 | SAMN04488513_101999 | SAMN04488513_102707 | Cu2+-exporting ATPase. | Copper chaperone CopZ. | 0.761 |
SHI68871.1 | SHJ66914.1 | SAMN04488513_101999 | SAMN04488513_10745 | Cu2+-exporting ATPase. | Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family. | 0.485 |
SHI68871.1 | SHJ66991.1 | SAMN04488513_101999 | SAMN04488513_10748 | Cu2+-exporting ATPase. | Cu+-exporting ATPase. | 0.795 |
SHI68947.1 | SHI68871.1 | SAMN04488513_1011001 | SAMN04488513_101999 | Copper chaperone CopZ. | Cu2+-exporting ATPase. | 0.912 |
SHI68947.1 | SHJ66991.1 | SAMN04488513_1011001 | SAMN04488513_10748 | Copper chaperone CopZ. | Cu+-exporting ATPase. | 0.761 |
SHJ05859.1 | SHI68871.1 | SAMN04488513_102707 | SAMN04488513_101999 | Copper chaperone CopZ. | Cu2+-exporting ATPase. | 0.761 |
SHJ05859.1 | SHJ66991.1 | SAMN04488513_102707 | SAMN04488513_10748 | Copper chaperone CopZ. | Cu+-exporting ATPase. | 0.761 |
SHJ66723.1 | SHJ66774.1 | SAMN04488513_10738 | SAMN04488513_10740 | Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Hypothetical protein. | 0.716 |
SHJ66723.1 | SHJ66801.1 | SAMN04488513_10738 | SAMN04488513_10741 | Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | FixH protein. | 0.638 |
SHJ66723.1 | SHJ66828.1 | SAMN04488513_10738 | SAMN04488513_10742 | Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Cytochrome c oxidase accessory protein FixG. | 0.793 |
SHJ66723.1 | SHJ66838.1 | SAMN04488513_10738 | SAMN04488513_10743 | Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Cytochrome c oxidase cbb3-type subunit 3. | 0.745 |
SHJ66723.1 | SHJ66914.1 | SAMN04488513_10738 | SAMN04488513_10745 | Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family. | 0.950 |
SHJ66723.1 | SHJ66937.1 | SAMN04488513_10738 | SAMN04488513_10746 | Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Cytochrome oxidase maturation protein, cbb3-type. | 0.455 |
SHJ66723.1 | SHJ66991.1 | SAMN04488513_10738 | SAMN04488513_10748 | Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Cu+-exporting ATPase. | 0.736 |
SHJ66774.1 | SHJ66723.1 | SAMN04488513_10740 | SAMN04488513_10738 | Hypothetical protein. | Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.716 |
SHJ66774.1 | SHJ66801.1 | SAMN04488513_10740 | SAMN04488513_10741 | Hypothetical protein. | FixH protein. | 0.954 |
SHJ66774.1 | SHJ66828.1 | SAMN04488513_10740 | SAMN04488513_10742 | Hypothetical protein. | Cytochrome c oxidase accessory protein FixG. | 0.957 |
SHJ66774.1 | SHJ66838.1 | SAMN04488513_10740 | SAMN04488513_10743 | Hypothetical protein. | Cytochrome c oxidase cbb3-type subunit 3. | 0.918 |
SHJ66774.1 | SHJ66914.1 | SAMN04488513_10740 | SAMN04488513_10745 | Hypothetical protein. | Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family. | 0.922 |
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