STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ79266.1Hypothetical protein. (377 aa)    
Predicted Functional Partners:
SHJ79104.1
Rhs element Vgr protein.
  
 
 0.946
SHJ79055.1
Hypothetical protein.
  
   0.939
SHJ79038.1
Baseplate J-like protein.
  
 
 0.922
SHJ79289.1
Protein of unknown function.
   
 
 0.921
SHJ79014.1
Hypothetical protein.
   
 
 0.897
SHK03886.1
Gene 25-like lysozyme.
  
   0.868
SHJ79127.1
LysM domain-containing protein.
  
 
 0.851
SHJ79174.1
Conserved hypothetical phage tail region protein.
  
 
 0.825
SHJ79197.1
Conserved hypothetical phage tail region protein.
  
 
 0.825
SHJ79242.1
Hypothetical protein.
       0.746
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.