Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI68839.1 | SHJ11096.1 | SAMN04488513_101998 | SAMN04488513_102867 | Helix-turn-helix domain-containing protein. | Transcriptional regulator, AraC family. | 0.414 |
SHI68839.1 | SHJ30997.1 | SAMN04488513_101998 | SAMN04488513_103383 | Helix-turn-helix domain-containing protein. | AraC-type DNA-binding protein. | 0.574 |
SHI68839.1 | SHJ73217.1 | SAMN04488513_101998 | SAMN04488513_1083 | Helix-turn-helix domain-containing protein. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.825 |
SHI68839.1 | SHJ79891.1 | SAMN04488513_101998 | SAMN04488513_10945 | Helix-turn-helix domain-containing protein. | Transcriptional regulator, AraC family. | 0.590 |
SHI68839.1 | SHK00381.1 | SAMN04488513_101998 | SAMN04488513_11616 | Helix-turn-helix domain-containing protein. | AraC-type DNA-binding protein. | 0.437 |
SHJ11096.1 | SHI68839.1 | SAMN04488513_102867 | SAMN04488513_101998 | Transcriptional regulator, AraC family. | Helix-turn-helix domain-containing protein. | 0.414 |
SHJ11096.1 | SHJ73217.1 | SAMN04488513_102867 | SAMN04488513_1083 | Transcriptional regulator, AraC family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.825 |
SHJ11096.1 | SHJ79891.1 | SAMN04488513_102867 | SAMN04488513_10945 | Transcriptional regulator, AraC family. | Transcriptional regulator, AraC family. | 0.538 |
SHJ29835.1 | SHJ30997.1 | SAMN04488513_103341 | SAMN04488513_103383 | Transcriptional regulator, AraC family. | AraC-type DNA-binding protein. | 0.719 |
SHJ29835.1 | SHJ73217.1 | SAMN04488513_103341 | SAMN04488513_1083 | Transcriptional regulator, AraC family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.825 |
SHJ29835.1 | SHJ79891.1 | SAMN04488513_103341 | SAMN04488513_10945 | Transcriptional regulator, AraC family. | Transcriptional regulator, AraC family. | 0.532 |
SHJ30997.1 | SHI68839.1 | SAMN04488513_103383 | SAMN04488513_101998 | AraC-type DNA-binding protein. | Helix-turn-helix domain-containing protein. | 0.574 |
SHJ30997.1 | SHJ29835.1 | SAMN04488513_103383 | SAMN04488513_103341 | AraC-type DNA-binding protein. | Transcriptional regulator, AraC family. | 0.719 |
SHJ30997.1 | SHJ73217.1 | SAMN04488513_103383 | SAMN04488513_1083 | AraC-type DNA-binding protein. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.846 |
SHJ30997.1 | SHJ79814.1 | SAMN04488513_103383 | SAMN04488513_10942 | AraC-type DNA-binding protein. | Transcriptional regulator, AraC family. | 0.417 |
SHJ30997.1 | SHJ79891.1 | SAMN04488513_103383 | SAMN04488513_10945 | AraC-type DNA-binding protein. | Transcriptional regulator, AraC family. | 0.711 |
SHJ73217.1 | SHI68839.1 | SAMN04488513_1083 | SAMN04488513_101998 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Helix-turn-helix domain-containing protein. | 0.825 |
SHJ73217.1 | SHJ11096.1 | SAMN04488513_1083 | SAMN04488513_102867 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Transcriptional regulator, AraC family. | 0.825 |
SHJ73217.1 | SHJ29835.1 | SAMN04488513_1083 | SAMN04488513_103341 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Transcriptional regulator, AraC family. | 0.825 |
SHJ73217.1 | SHJ30997.1 | SAMN04488513_1083 | SAMN04488513_103383 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | AraC-type DNA-binding protein. | 0.846 |
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