STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ87061.1Hypothetical protein. (364 aa)    
Predicted Functional Partners:
SHJ87275.1
Hypothetical protein.
 
 
   0.830
SHJ87349.1
Hydrogenase maturation protease.
 
     0.816
SHJ87367.1
Hydrogenase large subunit.
 
     0.808
SHJ87391.1
Hydrogenase small subunit.
 
     0.807
hypA
Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
     0.778
SHJ87088.1
Hydrogenase expression/formation protein HypE.
       0.659
SHJ87041.1
ABC-type nickel/cobalt efflux system, permease component RcnA.
 
     0.647
SHJ87165.1
Hydrogenase expression/formation protein HypC.
 
     0.532
SHJ66026.1
Hypothetical protein.
  
  0.509
SHJ95351.1
Subtilase family protein.
  
 
  0.468
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.