Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI62765.1 | SHJ73217.1 | SAMN04488513_101829 | SAMN04488513_1083 | 3-dehydro-L-gulonate 2-dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.883 |
SHI62765.1 | SHJ94255.1 | SAMN04488513_101829 | SAMN04488513_11334 | 3-dehydro-L-gulonate 2-dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family. | 1-aminocyclopropane-1-carboxylate deaminase. | 0.516 |
SHJ73217.1 | SHI62765.1 | SAMN04488513_1083 | SAMN04488513_101829 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 3-dehydro-L-gulonate 2-dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family. | 0.883 |
SHJ73217.1 | SHJ94255.1 | SAMN04488513_1083 | SAMN04488513_11334 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 1-aminocyclopropane-1-carboxylate deaminase. | 0.881 |
SHJ94232.1 | SHJ94255.1 | SAMN04488513_11333 | SAMN04488513_11334 | Hypothetical protein. | 1-aminocyclopropane-1-carboxylate deaminase. | 0.820 |
SHJ94232.1 | SHJ94287.1 | SAMN04488513_11333 | SAMN04488513_11335 | Hypothetical protein. | Flagellum-specific peptidoglycan hydrolase FlgJ. | 0.799 |
SHJ94232.1 | hemL | SAMN04488513_11333 | SAMN04488513_11336 | Hypothetical protein. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.674 |
SHJ94255.1 | SHI62765.1 | SAMN04488513_11334 | SAMN04488513_101829 | 1-aminocyclopropane-1-carboxylate deaminase. | 3-dehydro-L-gulonate 2-dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family. | 0.516 |
SHJ94255.1 | SHJ73217.1 | SAMN04488513_11334 | SAMN04488513_1083 | 1-aminocyclopropane-1-carboxylate deaminase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.881 |
SHJ94255.1 | SHJ94232.1 | SAMN04488513_11334 | SAMN04488513_11333 | 1-aminocyclopropane-1-carboxylate deaminase. | Hypothetical protein. | 0.820 |
SHJ94255.1 | SHJ94287.1 | SAMN04488513_11334 | SAMN04488513_11335 | 1-aminocyclopropane-1-carboxylate deaminase. | Flagellum-specific peptidoglycan hydrolase FlgJ. | 0.904 |
SHJ94255.1 | hemL | SAMN04488513_11334 | SAMN04488513_11336 | 1-aminocyclopropane-1-carboxylate deaminase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.797 |
SHJ94287.1 | SHJ94232.1 | SAMN04488513_11335 | SAMN04488513_11333 | Flagellum-specific peptidoglycan hydrolase FlgJ. | Hypothetical protein. | 0.799 |
SHJ94287.1 | SHJ94255.1 | SAMN04488513_11335 | SAMN04488513_11334 | Flagellum-specific peptidoglycan hydrolase FlgJ. | 1-aminocyclopropane-1-carboxylate deaminase. | 0.904 |
SHJ94287.1 | hemL | SAMN04488513_11335 | SAMN04488513_11336 | Flagellum-specific peptidoglycan hydrolase FlgJ. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.681 |
hemL | SHJ94232.1 | SAMN04488513_11336 | SAMN04488513_11333 | Glutamate-1-semialdehyde 2,1-aminomutase. | Hypothetical protein. | 0.674 |
hemL | SHJ94255.1 | SAMN04488513_11336 | SAMN04488513_11334 | Glutamate-1-semialdehyde 2,1-aminomutase. | 1-aminocyclopropane-1-carboxylate deaminase. | 0.797 |
hemL | SHJ94287.1 | SAMN04488513_11336 | SAMN04488513_11335 | Glutamate-1-semialdehyde 2,1-aminomutase. | Flagellum-specific peptidoglycan hydrolase FlgJ. | 0.681 |