STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ94287.1Flagellum-specific peptidoglycan hydrolase FlgJ. (285 aa)    
Predicted Functional Partners:
SHJ94255.1
1-aminocyclopropane-1-carboxylate deaminase.
      0.904
SHJ39198.1
N-acetylmuramoyl-L-alanine amidase.
  
 
 0.861
SHJ39046.1
Beta-glucosidase.
    
 0.840
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
   
  0.836
SHI67472.1
N-acetylmuramoyl-L-alanine amidase.
  
 
 0.827
SHJ85134.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
  
 
 0.811
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
 0.810
SHJ94232.1
Hypothetical protein.
       0.799
SHI87811.1
N-acetyl-anhydromuramyl-L-alanine amidase AmpD.
    
 0.759
SHJ01406.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
 0.744
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.