STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ95066.1Hypothetical protein. (203 aa)    
Predicted Functional Partners:
SHJ95351.1
Subtilase family protein.
  
 
  0.783
SHJ26565.1
C-terminal domain of CHU protein family protein.
  
     0.702
SHI55267.1
C1q domain-containing protein.
  
     0.700
SHJ26588.1
Conserved repeat domain-containing protein.
  
     0.673
SHI38718.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.646
SHJ39643.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.632
SHJ95235.1
Hypothetical protein.
  
     0.625
SHJ74799.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.619
SHJ95269.1
CHAT domain-containing protein.
  
     0.615
SHJ77199.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.609
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.