STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ96749.1Galactosamine 6-phosphate isomerase AgaS. (392 aa)    
Predicted Functional Partners:
SHJ96647.1
Sugar or nucleoside kinase, ribokinase family.
 
 
 0.832
SHJ39798.1
Glucosamine-6-phosphate deaminase.
    
 0.796
SHJ96625.1
Tagatose 1,6-diphosphate aldolase GatY/KbaY.
 
 
 0.793
SHI46134.1
N-acetylglucosamine-6-phosphate deacetylase.
 
 
 0.708
SHJ96260.1
N-acetylglucosamine-6-phosphate deacetylase.
 
 
 0.702
SHJ35185.1
6-phosphofructokinase 2; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.689
SHJ96778.1
Glycosyl Hydrolase Family 88.
       0.675
SHJ96574.1
Transcriptional regulator, DeoR family.
 
    0.645
SHJ96727.1
Glycosyl hydrolase family 20, catalytic domain.
 
     0.609
glmS
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
 
 0.600
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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