Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI63092.1 | SHJ60760.1 | SAMN04488513_101838 | SAMN04488513_106143 | Exonuclease III. | Hypothetical protein. | 0.556 |
SHI63092.1 | SHJ74799.1 | SAMN04488513_101838 | SAMN04488513_10854 | Exonuclease III. | Gliding motility-associated C-terminal domain-containing protein. | 0.663 |
SHI63092.1 | SHJ98208.1 | SAMN04488513_101838 | SAMN04488513_11510 | Exonuclease III. | Hypothetical protein. | 0.496 |
SHJ27503.1 | SHJ60760.1 | SAMN04488513_103253 | SAMN04488513_106143 | Di-glucose binding within endoplasmic reticulum. | Hypothetical protein. | 0.518 |
SHJ27503.1 | SHJ74799.1 | SAMN04488513_103253 | SAMN04488513_10854 | Di-glucose binding within endoplasmic reticulum. | Gliding motility-associated C-terminal domain-containing protein. | 0.436 |
SHJ27503.1 | SHJ98208.1 | SAMN04488513_103253 | SAMN04488513_11510 | Di-glucose binding within endoplasmic reticulum. | Hypothetical protein. | 0.410 |
SHJ60760.1 | SHI63092.1 | SAMN04488513_106143 | SAMN04488513_101838 | Hypothetical protein. | Exonuclease III. | 0.556 |
SHJ60760.1 | SHJ27503.1 | SAMN04488513_106143 | SAMN04488513_103253 | Hypothetical protein. | Di-glucose binding within endoplasmic reticulum. | 0.518 |
SHJ60760.1 | SHJ74799.1 | SAMN04488513_106143 | SAMN04488513_10854 | Hypothetical protein. | Gliding motility-associated C-terminal domain-containing protein. | 0.758 |
SHJ60760.1 | SHJ77199.1 | SAMN04488513_106143 | SAMN04488513_108132 | Hypothetical protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.716 |
SHJ60760.1 | SHJ98208.1 | SAMN04488513_106143 | SAMN04488513_11510 | Hypothetical protein. | Hypothetical protein. | 0.462 |
SHJ74799.1 | SHI63092.1 | SAMN04488513_10854 | SAMN04488513_101838 | Gliding motility-associated C-terminal domain-containing protein. | Exonuclease III. | 0.663 |
SHJ74799.1 | SHJ27503.1 | SAMN04488513_10854 | SAMN04488513_103253 | Gliding motility-associated C-terminal domain-containing protein. | Di-glucose binding within endoplasmic reticulum. | 0.436 |
SHJ74799.1 | SHJ60760.1 | SAMN04488513_10854 | SAMN04488513_106143 | Gliding motility-associated C-terminal domain-containing protein. | Hypothetical protein. | 0.758 |
SHJ74799.1 | SHJ77199.1 | SAMN04488513_10854 | SAMN04488513_108132 | Gliding motility-associated C-terminal domain-containing protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.680 |
SHJ74799.1 | SHJ98208.1 | SAMN04488513_10854 | SAMN04488513_11510 | Gliding motility-associated C-terminal domain-containing protein. | Hypothetical protein. | 0.411 |
SHJ77199.1 | SHJ60760.1 | SAMN04488513_108132 | SAMN04488513_106143 | Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.716 |
SHJ77199.1 | SHJ74799.1 | SAMN04488513_108132 | SAMN04488513_10854 | Outer membrane receptor proteins, mostly Fe transport. | Gliding motility-associated C-terminal domain-containing protein. | 0.680 |
SHJ77199.1 | SHJ98208.1 | SAMN04488513_108132 | SAMN04488513_11510 | Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.521 |
SHJ77199.1 | SHK01118.1 | SAMN04488513_108132 | SAMN04488513_1172 | Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.428 |
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