Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHI88954.1 | SHJ98483.1 | SAMN04488513_102178 | SAMN04488513_11521 | Magnesium chelatase subunit I. | Methyltransferase domain-containing protein. | 0.464 |
| SHJ04751.1 | SHJ07596.1 | SAMN04488513_102670 | SAMN04488513_102761 | FAD dependent oxidoreductase. | Ubiquinone biosynthesis protein. | 0.440 |
| SHJ04751.1 | SHJ37693.1 | SAMN04488513_102670 | SAMN04488513_104112 | FAD dependent oxidoreductase. | Amino acid adenylation domain-containing protein. | 0.936 |
| SHJ04751.1 | SHJ65775.1 | SAMN04488513_102670 | SAMN04488513_1078 | FAD dependent oxidoreductase. | PhnB protein. | 0.484 |
| SHJ04751.1 | SHJ98483.1 | SAMN04488513_102670 | SAMN04488513_11521 | FAD dependent oxidoreductase. | Methyltransferase domain-containing protein. | 0.575 |
| SHJ04751.1 | glyA | SAMN04488513_102670 | SAMN04488513_102323 | FAD dependent oxidoreductase. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.411 |
| SHJ07596.1 | SHJ04751.1 | SAMN04488513_102761 | SAMN04488513_102670 | Ubiquinone biosynthesis protein. | FAD dependent oxidoreductase. | 0.440 |
| SHJ07596.1 | SHJ37693.1 | SAMN04488513_102761 | SAMN04488513_104112 | Ubiquinone biosynthesis protein. | Amino acid adenylation domain-containing protein. | 0.534 |
| SHJ07596.1 | SHJ98483.1 | SAMN04488513_102761 | SAMN04488513_11521 | Ubiquinone biosynthesis protein. | Methyltransferase domain-containing protein. | 0.647 |
| SHJ07596.1 | kmo | SAMN04488513_102761 | SAMN04488513_105170 | Ubiquinone biosynthesis protein. | Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily. | 0.440 |
| SHJ37693.1 | SHJ04751.1 | SAMN04488513_104112 | SAMN04488513_102670 | Amino acid adenylation domain-containing protein. | FAD dependent oxidoreductase. | 0.936 |
| SHJ37693.1 | SHJ07596.1 | SAMN04488513_104112 | SAMN04488513_102761 | Amino acid adenylation domain-containing protein. | Ubiquinone biosynthesis protein. | 0.534 |
| SHJ37693.1 | SHJ98483.1 | SAMN04488513_104112 | SAMN04488513_11521 | Amino acid adenylation domain-containing protein. | Methyltransferase domain-containing protein. | 0.810 |
| SHJ37693.1 | gcvP | SAMN04488513_104112 | SAMN04488513_10833 | Amino acid adenylation domain-containing protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.858 |
| SHJ37693.1 | glyA | SAMN04488513_104112 | SAMN04488513_102323 | Amino acid adenylation domain-containing protein. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.902 |
| SHJ37693.1 | kmo | SAMN04488513_104112 | SAMN04488513_105170 | Amino acid adenylation domain-containing protein. | Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily. | 0.936 |
| SHJ65775.1 | SHJ04751.1 | SAMN04488513_1078 | SAMN04488513_102670 | PhnB protein. | FAD dependent oxidoreductase. | 0.484 |
| SHJ65775.1 | SHJ98483.1 | SAMN04488513_1078 | SAMN04488513_11521 | PhnB protein. | Methyltransferase domain-containing protein. | 0.528 |
| SHJ65775.1 | kmo | SAMN04488513_1078 | SAMN04488513_105170 | PhnB protein. | Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily. | 0.484 |
| SHJ66053.1 | SHJ98483.1 | SAMN04488513_10716 | SAMN04488513_11521 | Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family. | Methyltransferase domain-containing protein. | 0.591 |
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