STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL50389.1Trehalose utilisation. (635 aa)    
Predicted Functional Partners:
SDL50421.1
Quinoprotein glucose dehydrogenase.
 
     0.761
SDM98014.1
Enterochelin esterase.
  
     0.589
SDM60914.1
Protein of unknown function.
 
     0.585
SDM49250.1
Acetyl xylan esterase (AXE1).
  
     0.505
SDN07091.1
Protein of unknown function.
  
  
  0.503
SDM54375.1
Putative membrane-bound dehydrogenase domain-containing protein.
  
  
  0.500
SDN00882.1
GDSL-like Lipase/Acylhydrolase.
  
     0.494
SDM70884.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
  
  
  0.488
SDL93142.1
Cytochrome C oxidase, cbb3-type, subunit III.
 
  
  0.452
SDL60559.1
Putative membrane-bound dehydrogenase domain-containing protein.
  
  
  0.422
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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