STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL31867.1L-rhamnose mutarotase. (117 aa)    
Predicted Functional Partners:
SDL31828.1
L-fuconolactonase.
 
  
 0.918
SDM87617.1
L-fucose dehydrogenase.
 
    0.769
SDM87644.1
MFS transporter, FHS family, L-fucose permease.
 
    0.688
SDL60313.1
L-fuconolactonase.
 
  
 0.678
SDM45700.1
Sugar (pentulose or hexulose) kinase.
  
  
 0.627
SDL70691.1
Xylulokinase.
  
  
 0.614
SDM89689.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
    0.530
SDM05690.1
Fucose permease.
 
    0.522
SDM03964.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
    0.516
SDM87593.1
Hypothetical protein.
 
     0.505
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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