STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL21676.1Repeat domain-containing protein. (659 aa)    
Predicted Functional Partners:
SDL21251.1
Predicted neuraminidase (sialidase).
 
     0.943
SDM04199.1
PhoPQ-activated pathogenicity-related protein.
  
     0.769
SDM49250.1
Acetyl xylan esterase (AXE1).
  
     0.769
SDM67075.1
Alpha/beta hydrolase family protein.
  
     0.745
SDM54375.1
Putative membrane-bound dehydrogenase domain-containing protein.
  
     0.727
SDM67475.1
BNR repeat-like domain-containing protein.
  
     0.723
SDL47709.1
Predicted dehydrogenase.
  
     0.668
SDL43236.1
SMP-30/Gluconolaconase/LRE-like region-containing protein.
  
     0.650
SDM06046.1
solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.646
SDM37041.1
Hypothetical protein.
  
     0.628
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.