STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL33475.1PQQ-like domain-containing protein. (502 aa)    
Predicted Functional Partners:
SDM20972.1
Patatin-like phospholipase.
 
 
 0.611
SDN09838.1
Adenylate cyclase, class 3; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
  
  
  0.564
SDM53483.1
Flp pilus assembly protein TadD, contains TPR repeats.
  
    0.560
SDL38974.1
Starch-binding associating with outer membrane.
  
     0.558
SDL33502.1
Tetratricopeptide repeat-containing protein.
       0.531
SDL66010.1
NTE family protein.
  
 
 0.527
SDL23388.1
Hypothetical protein.
   
 
 0.522
SDL44999.1
Beta-barrel assembly machine subunit BamD.
   
 
 0.522
SDL71928.1
Hypothetical protein.
   
   0.512
SDL89473.1
Surface antigen.
   
   0.512
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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