STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL34147.1Uncharacterized conserved protein YndB, AHSA1/START domain. (127 aa)    
Predicted Functional Partners:
SDL33901.1
Protein of unknown function.
  
     0.759
SDM98537.1
pRiA4b ORF-3-like protein.
  
     0.740
SDL65062.1
Hypothetical protein.
  
     0.721
SDL61069.1
Uncharacterized metal-binding protein YceD, DUF177 family.
  
     0.710
SDL73997.1
Protein involved in gliding motility GldN.
  
     0.694
SDL69169.1
Protein of unknown function.
  
     0.675
SDL84517.1
Outer membrane lipoprotein-sorting protein.
 
     0.669
SDL69619.1
uroporphyrinogen-III synthase.
  
     0.667
SDL34128.1
Branched-chain amino acid aminotransferase.
 
     0.658
SDL87902.1
Hypothetical protein.
  
     0.610
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.