STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL36039.1ABC-2 type transport system permease protein. (353 aa)    
Predicted Functional Partners:
SDL35937.1
ABC-type multidrug transport system, ATPase component.
 
 0.989
SDL35974.1
ABC-2 type transport system ATP-binding protein.
 
 0.989
SDM38925.1
ABC-2 type transport system ATP-binding protein.
 
 0.948
SDL49435.1
ABC-2 type transport system ATP-binding protein.
 
 
 0.936
SDL49012.1
Cu-processing system ATP-binding protein.
 
 
 0.935
SDM01477.1
Protein involved in gliding motility GldA.
 
 
 0.935
SDM32669.1
ABC-type multidrug transport system, ATPase component.
 
 
 0.935
SDM98458.1
ABC-2 type transport system ATP-binding protein.
 
 
 0.935
SDM58861.1
Lipopolysaccharide export system ATP-binding protein.
   
  0.930
SDM10892.1
ABC transporter.
 
    
 0.900
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.