STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL62738.1DinB superfamily protein. (170 aa)    
Predicted Functional Partners:
SDL62714.1
Hypothetical protein.
       0.658
SDM04400.1
SprB repeat-containing protein.
  
     0.497
SDL81800.1
exo-1,4-beta-D-glucosaminidase; Belongs to the glycosyl hydrolase 2 family.
  
     0.484
SDL93228.1
Methane oxygenase PmoA.
  
     0.457
SDM14048.1
Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family.
  
     0.450
SDL62665.1
Exonuclease RecJ.
       0.418
SDL62694.1
Outer membrane receptor proteins, mostly Fe transport.
       0.418
SDM61092.1
Trehalose utilisation.
  
     0.402
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.