STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL59804.15-methylcytosine-specific restriction enzyme B. (876 aa)    
Predicted Functional Partners:
SDL59778.1
5-methylcytosine-specific restriction enzyme subunit McrC.
 
 
 0.990
SDM66232.1
5-methylcytosine-specific restriction enzyme subunit McrC.
 
 
 0.935
SDL59872.1
AAA domain-containing protein, putative AbiEii toxin, Type IV TA system.
       0.500
SDL59844.1
Hypothetical protein.
       0.493
SDM66001.1
Type I restriction enzyme M protein.
 
  
 0.486
SDM35970.1
Protein of unknown function.
 
     0.472
SDL59994.1
TaqI-like C-terminal specificity domain-containing protein.
 
   
 0.430
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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