STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL65611.1Cystathionine gamma-lyase. (384 aa)    
Predicted Functional Partners:
SDM02169.1
Aspartate kinase.
 
 
 0.963
SDN03523.1
Aspartate kinase.
 
 
 0.927
SDM19140.1
Cystathionine beta-synthase.
 0.898
SDL50621.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
  0.891
SDL86191.1
Cystathionine beta-synthase.
 0.878
SDM01788.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
  
 
 0.873
SDM69560.1
Cysteine synthase A.
 0.863
SDL22524.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
  
 
 0.847
metE
Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
  
 
 0.841
SDL60612.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
  
 
 0.841
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.