STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL66243.1Protein of unknown function. (259 aa)    
Predicted Functional Partners:
SDL66270.1
Tryptophan 2,3-dioxygenase apoenzyme.
   
   0.854
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
       0.803
SDL66301.1
Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain.
       0.768
SDN06969.1
Undecaprenyl-diphosphatase.
  
  
  0.690
SDL88589.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
   
 
 0.671
SDM86480.1
Protein of unknown function.
  
     0.625
SDL40594.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
     0.574
SDL72605.1
Peptidyl-prolyl cis-trans isomerase D.
 
    0.569
SDL66705.1
Ig-like domain-containing protein.
 
    0.565
SDM74910.1
Beta-barrel assembly machine subunit BamA.
  
     0.557
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.