STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL69712.1Protein of unknown function. (144 aa)    
Predicted Functional Partners:
SDL69679.1
Dolichol-phosphate mannosyltransferase.
       0.818
SDL69696.1
Dihydroorotase.
       0.818
SDL69637.1
Protein of unknown function.
 
     0.790
SDL45631.1
Hypothetical protein.
  
     0.748
SDL92691.1
Hypothetical protein.
  
     0.741
SDM84331.1
Hypothetical protein.
  
     0.738
SDM22258.1
Hypothetical protein.
  
     0.725
SDM87262.1
Aspartyl protease.
  
     0.653
SDM84298.1
Protein of unknown function.
  
     0.652
SDM87063.1
Outer membrane protein beta-barrel domain-containing protein.
  
     0.650
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.