Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL44968.1 | SDL70518.1 | SAMN04488514_101851 | SAMN04488514_102415 | RNA polymerase Rpb6. | Effector-binding domain-containing protein. | 0.524 |
SDL44968.1 | rpoA | SAMN04488514_101851 | SAMN04488514_11497 | RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
SDL44968.1 | rpoB | SAMN04488514_101851 | SAMN04488514_117102 | RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
SDL70489.1 | SDL70518.1 | SAMN04488514_102414 | SAMN04488514_102415 | SdiA-regulated. | Effector-binding domain-containing protein. | 0.773 |
SDL70489.1 | SDL70542.1 | SAMN04488514_102414 | SAMN04488514_102416 | SdiA-regulated. | PAP2 superfamily protein. | 0.817 |
SDL70489.1 | SDL70572.1 | SAMN04488514_102414 | SAMN04488514_102417 | SdiA-regulated. | Repeat domain-containing protein. | 0.773 |
SDL70489.1 | SDL70598.1 | SAMN04488514_102414 | SAMN04488514_102418 | SdiA-regulated. | Repeat domain-containing protein. | 0.773 |
SDL70518.1 | SDL44968.1 | SAMN04488514_102415 | SAMN04488514_101851 | Effector-binding domain-containing protein. | RNA polymerase Rpb6. | 0.524 |
SDL70518.1 | SDL70489.1 | SAMN04488514_102415 | SAMN04488514_102414 | Effector-binding domain-containing protein. | SdiA-regulated. | 0.773 |
SDL70518.1 | SDL70542.1 | SAMN04488514_102415 | SAMN04488514_102416 | Effector-binding domain-containing protein. | PAP2 superfamily protein. | 0.931 |
SDL70518.1 | SDL70572.1 | SAMN04488514_102415 | SAMN04488514_102417 | Effector-binding domain-containing protein. | Repeat domain-containing protein. | 0.945 |
SDL70518.1 | SDL70598.1 | SAMN04488514_102415 | SAMN04488514_102418 | Effector-binding domain-containing protein. | Repeat domain-containing protein. | 0.945 |
SDL70518.1 | SDL70719.1 | SAMN04488514_102415 | SAMN04488514_102422 | Effector-binding domain-containing protein. | Starch-binding associating with outer membrane. | 0.753 |
SDL70518.1 | SDL70747.1 | SAMN04488514_102415 | SAMN04488514_102423 | Effector-binding domain-containing protein. | Iron complex outermembrane recepter protein. | 0.736 |
SDL70518.1 | SDL72545.1 | SAMN04488514_102415 | SAMN04488514_102489 | Effector-binding domain-containing protein. | Hypothetical protein. | 0.582 |
SDL70518.1 | rpoA | SAMN04488514_102415 | SAMN04488514_11497 | Effector-binding domain-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.524 |
SDL70518.1 | rpoB | SAMN04488514_102415 | SAMN04488514_117102 | Effector-binding domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.762 |
SDL70542.1 | SDL70489.1 | SAMN04488514_102416 | SAMN04488514_102414 | PAP2 superfamily protein. | SdiA-regulated. | 0.817 |
SDL70542.1 | SDL70518.1 | SAMN04488514_102416 | SAMN04488514_102415 | PAP2 superfamily protein. | Effector-binding domain-containing protein. | 0.931 |
SDL70542.1 | SDL70572.1 | SAMN04488514_102416 | SAMN04488514_102417 | PAP2 superfamily protein. | Repeat domain-containing protein. | 0.947 |
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