STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL71187.1Diphosphomevalonate decarboxylase. (360 aa)    
Predicted Functional Partners:
SDL71212.1
Mevalonate kinase.
 
 
 0.983
SDM84422.1
Isopentenyl-diphosphate delta-isomerase.
 
 
 0.982
SDL72636.1
Mevalonate kinase.
 
 
 0.955
SDL46089.1
NUDIX domain-containing protein.
  
 
 0.932
SDM15751.1
Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family.
  
 0.903
SDL72666.1
3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family.
 
 
 0.902
SDL41009.1
Protein of unknown function.
   
 
 0.673
SDL71239.1
4-hydroxybenzoate polyprenyltransferase.
     
 0.598
SDL73997.1
Protein involved in gliding motility GldN.
  
     0.584
SDM01135.1
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.582
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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