STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL83739.1Lysophospholipase, alpha-beta hydrolase superfamily. (274 aa)    
Predicted Functional Partners:
SDL27622.1
Amino acid adenylation domain-containing protein.
  
 0.951
SDL88444.1
Long-chain acyl-CoA synthetase.
    
 0.851
SDM52276.1
Glycerol kinase; Belongs to the FGGY kinase family.
 
  
 0.825
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.822
SDN11600.1
Aldo/keto reductase family protein.
   
 
  0.778
SDL31223.1
4Fe-4S dicluster domain-containing protein.
   
   0.740
SDL71750.1
4Fe-4S binding domain-containing protein.
   
   0.740
SDL27486.1
Amino acid adenylation domain-containing protein.
  
 0.618
SDL27711.1
Phosphopantetheine attachment site.
  
 0.600
tilS
tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
       0.599
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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