STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL80935.1Mannobiose 2-epimerase. (423 aa)    
Predicted Functional Partners:
SDL80971.1
Hypothetical protein.
       0.727
SDL80889.1
Acetyl xylan esterase (AXE1).
 
     0.695
SDL21643.1
Two component regulator propeller.
  
     0.594
SDM48810.1
SusD family protein.
  
     0.571
SDL60529.1
Sugar phosphate isomerase/epimerase.
  
     0.542
SDM60855.1
Repeat domain-containing protein.
  
     0.498
SDM71172.1
Glycosyl hydrolase family 20, catalytic domain.
  
  
  0.456
SDL25458.1
Predicted glycosyl hydrolase, GH43/DUF377 family.
 
   
 0.451
SDM71200.1
Glycosyl hydrolase family 20, domain 2.
  
  
  0.451
SDM04500.1
Heparinase II/III-like protein.
  
     0.428
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.