STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL87437.1PAS/PAC sensor signal transduction histidine kinase. (399 aa)    
Predicted Functional Partners:
SDL28699.1
Hypothetical protein.
 
 0.998
SDL99650.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
0.998
SDN07491.1
Signal transduction histidine kinase.
0.998
SDM84266.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 0.995
SDM59002.1
GAF sensor signal transduction histidine kinase.
 
0.993
SDL50590.1
Signal transduction histidine kinase.
 
0.989
SDM52385.1
Signal transduction histidine kinase.
0.983
SDL49302.1
Signal transduction histidine kinase.
0.982
SDM14368.1
Ligand-binding sensor domain-containing protein.
0.981
SDL50203.1
Two component regulator propeller.
 
0.979
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.