STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL87713.1Uncharacterized membrane protein. (339 aa)    
Predicted Functional Partners:
SDL87686.1
Putative membrane protein.
 
    
0.787
SDL87740.1
Shikimate dehydrogenase.
       0.786
SDL87764.1
Protein of unknown function.
 
     0.549
SDL87658.1
Tfp pilus assembly protein PilF.
       0.548
SDL72575.1
Hemolysin, contains CBS domains.
 
     0.497
SDM59200.1
Hypothetical protein.
  
     0.482
SDL72484.1
Hypothetical protein.
  
     0.480
SDN03059.1
Hypothetical protein.
  
     0.402
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.