STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL87817.1Regulatory protein, luxR family. (317 aa)    
Predicted Functional Partners:
SDL28699.1
Hypothetical protein.
   
 0.927
SDN07491.1
Signal transduction histidine kinase.
   
 0.927
SDL37273.1
PAS domain S-box-containing protein.
  
 0.860
SDL99650.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
  
 0.854
SDL87792.1
Hypothetical protein.
 
     0.803
SDM84266.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
 0.780
SDM82551.1
Tetratricopeptide repeat-containing protein.
  
 0.742
SDM22637.1
Tetratricopeptide repeat-containing protein.
 
  0.682
SDM12870.1
Tetratricopeptide repeat-containing protein.
 
 0.677
SDL29116.1
HAMP domain-containing protein.
   
 0.669
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.