Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL88345.1 | SDL88398.1 | SAMN04488514_103268 | SAMN04488514_103270 | 16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Hypothetical protein. | 0.458 |
SDL88345.1 | SDL88424.1 | SAMN04488514_103268 | SAMN04488514_103271 | 16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Ribosomal protein S18 acetylase RimI. | 0.458 |
SDL88345.1 | purL | SAMN04488514_103268 | SAMN04488514_103269 | 16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.613 |
SDL88398.1 | SDL88345.1 | SAMN04488514_103270 | SAMN04488514_103268 | Hypothetical protein. | 16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.458 |
SDL88398.1 | SDL88424.1 | SAMN04488514_103270 | SAMN04488514_103271 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.773 |
SDL88398.1 | SDL88444.1 | SAMN04488514_103270 | SAMN04488514_103272 | Hypothetical protein. | Long-chain acyl-CoA synthetase. | 0.448 |
SDL88398.1 | purL | SAMN04488514_103270 | SAMN04488514_103269 | Hypothetical protein. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.714 |
SDL88424.1 | SDL88345.1 | SAMN04488514_103271 | SAMN04488514_103268 | Ribosomal protein S18 acetylase RimI. | 16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.458 |
SDL88424.1 | SDL88398.1 | SAMN04488514_103271 | SAMN04488514_103270 | Ribosomal protein S18 acetylase RimI. | Hypothetical protein. | 0.773 |
SDL88424.1 | SDL88444.1 | SAMN04488514_103271 | SAMN04488514_103272 | Ribosomal protein S18 acetylase RimI. | Long-chain acyl-CoA synthetase. | 0.448 |
SDL88424.1 | purL | SAMN04488514_103271 | SAMN04488514_103269 | Ribosomal protein S18 acetylase RimI. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.714 |
SDL88444.1 | SDL88398.1 | SAMN04488514_103272 | SAMN04488514_103270 | Long-chain acyl-CoA synthetase. | Hypothetical protein. | 0.448 |
SDL88444.1 | SDL88424.1 | SAMN04488514_103272 | SAMN04488514_103271 | Long-chain acyl-CoA synthetase. | Ribosomal protein S18 acetylase RimI. | 0.448 |
SDL88444.1 | purL | SAMN04488514_103272 | SAMN04488514_103269 | Long-chain acyl-CoA synthetase. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.520 |
purL | SDL88345.1 | SAMN04488514_103269 | SAMN04488514_103268 | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.613 |
purL | SDL88398.1 | SAMN04488514_103269 | SAMN04488514_103270 | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | Hypothetical protein. | 0.714 |
purL | SDL88424.1 | SAMN04488514_103269 | SAMN04488514_103271 | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | Ribosomal protein S18 acetylase RimI. | 0.714 |
purL | SDL88444.1 | SAMN04488514_103269 | SAMN04488514_103272 | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | Long-chain acyl-CoA synthetase. | 0.520 |