STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL88616.1Predicted arabinose efflux permease, MFS family. (387 aa)    
Predicted Functional Partners:
SDL27622.1
Amino acid adenylation domain-containing protein.
    
 0.823
SDM05019.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
 0.642
SDM46721.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
     
 0.642
SDL88642.1
Peptidase family M28.
       0.636
SDL88589.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
     
 0.566
SDL88672.1
Peptidase family M1.
 
     0.521
SDL47088.1
MG2 domain-containing protein.
  
     0.480
SDL35906.1
HlyD family secretion protein.
  
 
 0.451
SDM02169.1
Aspartate kinase.
  
  0.430
SDL88565.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
       0.403
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.