STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL81401.1Component of the Tol biopolymer transport system. (459 aa)    
Predicted Functional Partners:
SDL81578.1
Hypothetical protein.
 
     0.852
SDL21708.1
Hypothetical protein.
  
     0.755
SDL81314.1
Hypothetical protein.
 
     0.749
SDL21643.1
Two component regulator propeller.
 
     0.747
SDL21380.1
PhoPQ-activated pathogenicity-related protein.
  
     0.715
SDL30748.1
Hypothetical protein.
  
     0.715
SDL81612.1
Starch-binding associating with outer membrane.
 
    0.697
SDM06046.1
solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.683
SDL81438.1
D-sedoheptulose 7-phosphate isomerase.
 
    0.678
SDL81641.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.642
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.