STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL88920.1Hypothetical protein. (213 aa)    
Predicted Functional Partners:
SDM22099.1
Hypothetical protein.
  
     0.606
SDM39645.1
Thiol-disulfide isomerase or thioredoxin.
  
     0.577
SDL25155.1
Uncharacterized membrane protein.
  
     0.551
SDN13358.1
CUB domain-containing protein.
  
     0.538
SDL60019.1
Predicted nucleotidyltransferase.
  
     0.505
SDL88866.1
Protein of unknown function.
       0.497
SDL88892.1
Putative redox protein.
       0.497
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
   
    0.483
SDL98937.1
OsmC-like protein.
  
     0.476
SDM09811.1
Membrane-bound lytic murein transglycosylase D.
    
   0.439
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.