STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL89047.1FG-GAP repeat-containing protein. (1121 aa)    
Predicted Functional Partners:
SDL89077.1
Carbon starvation protein CstA.
       0.773
SDL70542.1
PAP2 superfamily protein.
 
    0.764
SDL89101.1
Hypothetical protein.
       0.746
SDL89128.1
FAD dependent oxidoreductase.
       0.746
SDL89158.1
Hypothetical protein.
       0.716
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.658
SDN07449.1
PAP2 superfamily protein.
 
    0.650
SDL70719.1
Starch-binding associating with outer membrane.
  
 
   0.497
SDL50621.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
   0.474
SDL89188.1
Starch-binding associating with outer membrane.
       0.468
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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