Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL28699.1 | SDL37273.1 | SAMN04488514_101279 | SAMN04488514_101567 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.999 |
SDL28699.1 | SDL50590.1 | SAMN04488514_101279 | SAMN04488514_1011044 | Hypothetical protein. | Signal transduction histidine kinase. | 0.999 |
SDL28699.1 | SDL90556.1 | SAMN04488514_101279 | SAMN04488514_103344 | Hypothetical protein. | Hypothetical protein. | 0.684 |
SDL28699.1 | SDM12870.1 | SAMN04488514_101279 | SAMN04488514_105145 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.998 |
SDL28699.1 | SDM54684.1 | SAMN04488514_101279 | SAMN04488514_110107 | Hypothetical protein. | Transcriptional regulator, AraC family. | 0.926 |
SDL28699.1 | SDN07491.1 | SAMN04488514_101279 | SAMN04488514_12237 | Hypothetical protein. | Signal transduction histidine kinase. | 0.998 |
SDL28699.1 | adk | SAMN04488514_101279 | SAMN04488514_11444 | Hypothetical protein. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.527 |
SDL37273.1 | SDL28699.1 | SAMN04488514_101567 | SAMN04488514_101279 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.999 |
SDL37273.1 | SDL50590.1 | SAMN04488514_101567 | SAMN04488514_1011044 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDL37273.1 | SDL90556.1 | SAMN04488514_101567 | SAMN04488514_103344 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.750 |
SDL37273.1 | SDM12870.1 | SAMN04488514_101567 | SAMN04488514_105145 | PAS domain S-box-containing protein. | Tetratricopeptide repeat-containing protein. | 0.988 |
SDL37273.1 | SDM54684.1 | SAMN04488514_101567 | SAMN04488514_110107 | PAS domain S-box-containing protein. | Transcriptional regulator, AraC family. | 0.915 |
SDL37273.1 | SDN07491.1 | SAMN04488514_101567 | SAMN04488514_12237 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDL37273.1 | adk | SAMN04488514_101567 | SAMN04488514_11444 | PAS domain S-box-containing protein. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.622 |
SDL50590.1 | SDL28699.1 | SAMN04488514_1011044 | SAMN04488514_101279 | Signal transduction histidine kinase. | Hypothetical protein. | 0.999 |
SDL50590.1 | SDL37273.1 | SAMN04488514_1011044 | SAMN04488514_101567 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SDL50590.1 | SDL90556.1 | SAMN04488514_1011044 | SAMN04488514_103344 | Signal transduction histidine kinase. | Hypothetical protein. | 0.731 |
SDL50590.1 | SDM12870.1 | SAMN04488514_1011044 | SAMN04488514_105145 | Signal transduction histidine kinase. | Tetratricopeptide repeat-containing protein. | 0.991 |
SDL50590.1 | SDM54684.1 | SAMN04488514_1011044 | SAMN04488514_110107 | Signal transduction histidine kinase. | Transcriptional regulator, AraC family. | 0.937 |
SDL50590.1 | SDN07491.1 | SAMN04488514_1011044 | SAMN04488514_12237 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
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