STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL91286.1DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. (441 aa)    
Predicted Functional Partners:
SDL91318.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.975
SDM84266.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.967
SDL99650.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
  
 0.896
SDL28699.1
Hypothetical protein.
  
 0.861
SDN07491.1
Signal transduction histidine kinase.
  
 0.861
SDL50590.1
Signal transduction histidine kinase.
  
0.856
SDL50621.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.852
SDL37273.1
PAS domain S-box-containing protein.
   
 0.843
SDM54684.1
Transcriptional regulator, AraC family.
  
 0.828
SDM87016.1
RNA polymerase, sigma 54 subunit, RpoN/SigL.
 
 
 0.826
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.