STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL93362.1Trehalose utilisation. (310 aa)    
Predicted Functional Partners:
SDM13405.1
Hypothetical protein.
  
  
 
0.806
SDL88789.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
  
  
 
0.799
SDM19354.1
Cytochrome c.
  
  
 
0.799
SDL93333.1
Transcriptional regulator, LacI family.
       0.773
SDL93228.1
Methane oxygenase PmoA.
 
     0.727
SDL87792.1
Hypothetical protein.
  
     0.588
SDL93193.1
Predicted dehydrogenase.
 
  
  0.576
SDL93171.1
Putative oxidoreductase C terminal domain-containing protein.
 
  
  0.535
SDL93142.1
Cytochrome C oxidase, cbb3-type, subunit III.
  
  0.522
SDL60155.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
 
  
  0.494
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.