STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL82784.1Hypothetical protein. (1280 aa)    
Predicted Functional Partners:
SDL82808.1
Hypothetical protein.
 
 
   0.962
SDL82838.1
Baseplate J-like protein.
 
 
   0.962
SDL82927.1
Rhs element Vgr protein.
 
 
   0.961
SDL82865.1
Hypothetical protein.
 
 
   0.960
SDL82956.1
Hypothetical protein.
 
 
   0.954
SDL83018.1
Conserved hypothetical phage tail region protein.
 
 
   0.949
SDL83042.1
Conserved hypothetical phage tail region protein.
 
 
   0.949
SDL82757.1
Hypothetical protein.
 
     0.946
SDL83075.1
Hypothetical protein.
 
 
   0.927
SDL82895.1
Zn-binding Pro-Ala-Ala-Arg (PAAR) domain-containing protein, incolved in TypeVI secretion.
 
     0.925
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.