STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM02235.1CarboxypepD_reg-like domain-containing protein. (892 aa)    
Predicted Functional Partners:
SDM02256.1
GLPGLI family protein.
 
     0.914
SDN07854.1
Conserved repeat domain-containing protein.
  
 
   0.673
SDM21919.1
Protein of unknown function (DU1801).
  
     0.584
SDL50149.1
Starch-binding associating with outer membrane.
  
 
   0.561
SDL42742.1
Hypothetical protein.
  
     0.530
SDM14488.1
Hypothetical protein.
  
     0.501
SDL66188.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
   0.500
SDM33042.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
 
   
 0.497
SDM33061.1
Predicted protein.
  
     0.486
SDL71899.1
Hypothetical protein.
  
     0.467
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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