STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM04835.1Alginate export. (427 aa)    
Predicted Functional Partners:
SDM04807.1
MFS transporter, NNP family, nitrate/nitrite transporter.
 
     0.822
SDM05045.1
Rubredoxin.
 
     0.801
SDM04666.1
PAS domain S-box-containing protein.
 
     0.739
SDM05019.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
     0.698
SDM98046.1
Hypothetical protein.
  
 
 0.572
SDM04710.1
Nitrite reductase (NADH) small subunit.
 
     0.537
SDM04856.1
Two component transcriptional regulator, LuxR family.
 
     0.530
SDM74277.1
OmpA family protein.
  
   0.528
SDM09892.1
WD40-like Beta Propeller Repeat.
   
 
 0.493
SDM98591.1
WD40-like Beta Propeller Repeat.
   
 
 0.493
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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