Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL39050.1 | SDM05500.1 | SAMN04488514_101637 | SAMN04488514_104285 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.641 |
SDL91596.1 | SDM05500.1 | SAMN04488514_103377 | SAMN04488514_104285 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.706 |
SDM05442.1 | SDM05469.1 | SAMN04488514_104283 | SAMN04488514_104284 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.924 |
SDM05442.1 | SDM05500.1 | SAMN04488514_104283 | SAMN04488514_104285 | Starch-binding associating with outer membrane. | FecR family protein. | 0.603 |
SDM05442.1 | SDM05531.1 | SAMN04488514_104283 | SAMN04488514_104286 | Starch-binding associating with outer membrane. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.550 |
SDM05469.1 | SDM05442.1 | SAMN04488514_104284 | SAMN04488514_104283 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.924 |
SDM05469.1 | SDM05500.1 | SAMN04488514_104284 | SAMN04488514_104285 | TonB-linked outer membrane protein, SusC/RagA family. | FecR family protein. | 0.715 |
SDM05469.1 | SDM05531.1 | SAMN04488514_104284 | SAMN04488514_104286 | TonB-linked outer membrane protein, SusC/RagA family. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.573 |
SDM05500.1 | SDL39050.1 | SAMN04488514_104285 | SAMN04488514_101637 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.641 |
SDM05500.1 | SDL91596.1 | SAMN04488514_104285 | SAMN04488514_103377 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.706 |
SDM05500.1 | SDM05442.1 | SAMN04488514_104285 | SAMN04488514_104283 | FecR family protein. | Starch-binding associating with outer membrane. | 0.603 |
SDM05500.1 | SDM05469.1 | SAMN04488514_104285 | SAMN04488514_104284 | FecR family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.715 |
SDM05500.1 | SDM05531.1 | SAMN04488514_104285 | SAMN04488514_104286 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.783 |
SDM05500.1 | SDM48936.1 | SAMN04488514_104285 | SAMN04488514_109127 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.776 |
SDM05500.1 | SDM54733.1 | SAMN04488514_104285 | SAMN04488514_110109 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.703 |
SDM05500.1 | SDM67047.1 | SAMN04488514_104285 | SAMN04488514_112108 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.650 |
SDM05500.1 | SDM88317.1 | SAMN04488514_104285 | SAMN04488514_11674 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.778 |
SDM05500.1 | SDN08869.1 | SAMN04488514_104285 | SAMN04488514_12320 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.716 |
SDM05531.1 | SDM05442.1 | SAMN04488514_104286 | SAMN04488514_104283 | RNA polymerase sigma-70 factor, ECF subfamily. | Starch-binding associating with outer membrane. | 0.550 |
SDM05531.1 | SDM05469.1 | SAMN04488514_104286 | SAMN04488514_104284 | RNA polymerase sigma-70 factor, ECF subfamily. | TonB-linked outer membrane protein, SusC/RagA family. | 0.573 |
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