STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL98937.1OsmC-like protein. (134 aa)    
Predicted Functional Partners:
SDL23757.1
2-oxoisovalerate dehydrogenase E1 component.
    
  0.706
SDL22524.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
    
  0.706
SDL25613.1
CotH protein.
  
     0.562
SDN11577.1
Luciferase-type oxidoreductase, BA3436 family.
 
     0.480
SDL98877.1
Hypothetical protein.
       0.478
SDL98907.1
Protein of unknown function.
       0.478
SDL88920.1
Hypothetical protein.
  
     0.476
SDM65870.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.420
SDL26249.1
Transcriptional regulator, TetR family.
  
    0.415
SDM22416.1
Major Facilitator Superfamily protein.
  
     0.414
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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