Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL31379.1 | SDM11855.1 | SAMN04488514_101366 | SAMN04488514_105101 | Hypothetical protein. | Outer membrane protein beta-barrel domain-containing protein. | 0.671 |
SDL62251.1 | SDM11855.1 | SAMN04488514_10299 | SAMN04488514_105101 | Signal transduction histidine kinase. | Outer membrane protein beta-barrel domain-containing protein. | 0.786 |
SDL62251.1 | SDM84266.1 | SAMN04488514_10299 | SAMN04488514_115121 | Signal transduction histidine kinase. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.982 |
SDM11855.1 | SDL31379.1 | SAMN04488514_105101 | SAMN04488514_101366 | Outer membrane protein beta-barrel domain-containing protein. | Hypothetical protein. | 0.671 |
SDM11855.1 | SDL62251.1 | SAMN04488514_105101 | SAMN04488514_10299 | Outer membrane protein beta-barrel domain-containing protein. | Signal transduction histidine kinase. | 0.786 |
SDM11855.1 | SDM11881.1 | SAMN04488514_105101 | SAMN04488514_105102 | Outer membrane protein beta-barrel domain-containing protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.643 |
SDM11855.1 | SDM11906.1 | SAMN04488514_105101 | SAMN04488514_105103 | Outer membrane protein beta-barrel domain-containing protein. | Hypothetical protein. | 0.850 |
SDM11855.1 | SDM15642.1 | SAMN04488514_105101 | SAMN04488514_105255 | Outer membrane protein beta-barrel domain-containing protein. | Outer membrane protein TolC. | 0.643 |
SDM11855.1 | SDM23129.1 | SAMN04488514_105101 | SAMN04488514_106161 | Outer membrane protein beta-barrel domain-containing protein. | Hypothetical protein. | 0.648 |
SDM11855.1 | SDM80712.1 | SAMN04488514_105101 | SAMN04488514_1153 | Outer membrane protein beta-barrel domain-containing protein. | Hypothetical protein. | 0.613 |
SDM11855.1 | SDM84266.1 | SAMN04488514_105101 | SAMN04488514_115121 | Outer membrane protein beta-barrel domain-containing protein. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.865 |
SDM11855.1 | SDN03029.1 | SAMN04488514_105101 | SAMN04488514_12028 | Outer membrane protein beta-barrel domain-containing protein. | Protein of unknown function. | 0.666 |
SDM11855.1 | SDN03389.1 | SAMN04488514_105101 | SAMN04488514_12041 | Outer membrane protein beta-barrel domain-containing protein. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.596 |
SDM11881.1 | SDM11855.1 | SAMN04488514_105102 | SAMN04488514_105101 | RNA polymerase sigma-70 factor, ECF subfamily. | Outer membrane protein beta-barrel domain-containing protein. | 0.643 |
SDM11881.1 | SDM11906.1 | SAMN04488514_105102 | SAMN04488514_105103 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.693 |
SDM11881.1 | SDM84266.1 | SAMN04488514_105102 | SAMN04488514_115121 | RNA polymerase sigma-70 factor, ECF subfamily. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.486 |
SDM11906.1 | SDM11855.1 | SAMN04488514_105103 | SAMN04488514_105101 | Hypothetical protein. | Outer membrane protein beta-barrel domain-containing protein. | 0.850 |
SDM11906.1 | SDM11881.1 | SAMN04488514_105103 | SAMN04488514_105102 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.693 |
SDM11906.1 | SDN03029.1 | SAMN04488514_105103 | SAMN04488514_12028 | Hypothetical protein. | Protein of unknown function. | 0.486 |
SDM11906.1 | SDN03389.1 | SAMN04488514_105103 | SAMN04488514_12041 | Hypothetical protein. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.661 |
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