STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM12091.1Tetratricopeptide repeat-containing protein. (587 aa)    
Predicted Functional Partners:
SDM12047.1
3-oxoacid CoA-transferase subunit A.
       0.590
SDM12068.1
3-oxoacid CoA-transferase subunit B.
       0.590
SDM70724.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.523
SDM12135.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.461
SDM77922.1
Hypothetical protein.
  
     0.459
SDL47088.1
MG2 domain-containing protein.
 
  
 0.453
SDL60368.1
Starch-binding associating with outer membrane.
  
     0.441
SDL67755.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.435
SDL49382.1
Starch-binding associating with outer membrane.
  
     0.418
SDL42211.1
Protein of unknown function.
  
     0.411
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.