STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM14828.1Nucleoside transporter. (409 aa)    
Predicted Functional Partners:
SDM14806.1
Uncharacterized damage-inducible protein DinB (forms a four-helix bundle).
 
     0.783
SDM14742.1
Gluconate 2-dehydrogenase subunit 3.
 
     0.757
SDM14784.1
Sugar phosphate isomerase/epimerase.
 
    0.747
SDM14880.1
Predicted dehydrogenase.
 
     0.744
SDM14763.1
Choline dehydrogenase.
 
     0.722
SDM82351.1
Hydroxypyruvate isomerase.
 
     0.641
SDM14714.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
     0.525
SDM14971.1
Protein of unknown function.
 
     0.506
SDM14927.1
Choline dehydrogenase.
 
     0.495
SDM59769.1
Choline dehydrogenase.
 
     0.495
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.