STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM10413.1Spore coat polysaccharide biosynthesis protein SpsF. (277 aa)    
Predicted Functional Partners:
SDM10387.1
N,N'-diacetyllegionaminate synthase.
  
 0.957
SDM10314.1
N-acetylneuraminate synthase.
 
  
 0.932
SDM10338.1
GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing).
 
     0.825
SDM10474.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
     0.794
SDM10366.1
Nucleotidyl transferase.
 
    0.779
SDM10450.1
YhcH/YjgK/YiaL family protein.
       0.773
SDM10538.1
Maltose O-acetyltransferase.
       0.763
SDM10499.1
Hypothetical protein.
  
    0.759
SDM10569.1
O-antigen ligase.
  
    0.759
SDM10520.1
Hypothetical protein.
       0.757
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.