STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM09471.1Putative Holin-X, holin superfamily III. (116 aa)    
Predicted Functional Partners:
SDM09443.1
Gas vesicle protein.
 
     0.949
SDM09495.1
Hypothetical protein.
       0.789
SDL37150.1
Gas vesicle protein.
 
     0.783
SDL69637.1
Protein of unknown function.
  
     0.715
SDL42179.1
Hypothetical protein.
  
     0.657
SDL85362.1
Hypothetical protein.
  
     0.622
SDL45631.1
Hypothetical protein.
  
     0.539
SDM10731.1
Hypothetical protein.
  
     0.515
SDL67265.1
Hypothetical protein.
  
     0.454
SDM23094.1
Outer membrane protein transport protein (OMPP1/FadL/TodX).
  
     0.442
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.