STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM21919.1Protein of unknown function (DU1801). (119 aa)    
Predicted Functional Partners:
SDM01348.1
Hypothetical protein.
  
     0.628
SDM31624.1
Hypothetical protein.
  
     0.627
SDM53889.1
Protein of unknown function.
  
     0.621
SDM12843.1
Protein of unknown function.
  
     0.613
SDM21896.1
Hypothetical protein.
       0.594
SDL46773.1
Hypothetical protein.
  
     0.587
SDM02235.1
CarboxypepD_reg-like domain-containing protein.
  
     0.584
SDM02256.1
GLPGLI family protein.
  
     0.525
SDL46667.1
Alpha-amylase.
  
     0.477
SDM87354.1
Hypothetical protein.
  
     0.472
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.